AFNI Message Board

Topic	Replies	Views	Activity
Skull Stripping Issues	1	50	January 30, 2026
3dLMEr error on cluster environment 3dlmer	1	38	January 24, 2026
@stim_analyze and make_random_timing.py	5	47	January 23, 2026
obliquity_remover.py crashes	1	22	January 22, 2026
obliquity_remover.py questions afni_procpy , obliquity_removerpy	9	57	January 6, 2026
gltCode in 3dLME 3dlme	4	63	January 21, 2026
QC recommendations after running fMRIPrep + partial afni_proc.py (mask/scale/regress only)	35	212	January 20, 2026
Calculating spectral signatures for each region	7	68	January 7, 2026
partial coverage alignment failure - follow-up	11	165	December 30, 2025
censoring data and design matrix column is all zeros 3ddeconvolve , 3dremlfit	6	104	December 18, 2025
(also) Failed to save pictures to disk in SUMA	6	45	December 10, 2025
blur=0 gets ignored in AP? afni_procpy	2	26	December 9, 2025
Failed of saving pictures to disk in SUMA	4	137	July 19, 2023
Important warning for 3dMVM users regarding the R package 'phia' 3dmvm	2	66	December 6, 2025
GLM Analysis with multiple files (3dTcat or 3ddeconvolve?) 3ddeconvolve	3	38	December 3, 2025
Question on Finite Impulse Response (FIR) Analysis : Should Regressor Files Include Duration or Onset Only?	1	48	December 2, 2025
Question on group-level analysis with subject-specific covariate	1	40	November 26, 2025
copy tagset from one dataset to another	2	27	November 25, 2025
TSNR extreme values afni_procpy , tsnr	4	58	November 24, 2025
Voxel selection in SUMA suma	4	59	November 20, 2025
Multi-echo preprocessing in AFNI - volreg step volreg , afni_procpy , multiecho	7	87	November 19, 2025
Epi 2 anat alignment using afni_proc.py and orbitofrontal cortex	4	52	November 19, 2025
Label table for 3dNetCorr	5	67	November 18, 2025
Best way/tutorial to make activation brain images using AFNI commands chauffeur_afni , 2dcat , colormaps	11	173	November 18, 2025
3dMVM beginner question: one group, two qvars	18	347	November 17, 2025
Always use Giant_Move - is this a problem? sswarper , afni_procpy , 3dallineate	3	45	November 16, 2025
Question about the center value of a colormap in SUMA	2	55	November 14, 2025
Including per-stim duration for -stim_times_IM and GAM	3	82	November 14, 2025
Testing Quadratic Relationships in AFNI	1	59	November 14, 2025
3dUndump issue	1	41	November 13, 2025

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