TORTOISE --structural path_to_your_anatomical_NIFTI


Does --structural path_to_your_anatomical_NIFTI refer to T1 or T2w image?
TORTOISEProcess --up_data path_to_your_DWI_NIFTI_file --structural path_to_your_anatomical_NIFTI --denoising for_final

Thank you!


I believe a T2w dataset is what should go there, since that looks quite a lot like the b = 0 s/mm^2 reference volume in the DWI dset. If possible, having a T2w volume acquired with fat suppression on is also preferable.


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