Split from this thread:
https://afni.nimh.nih.gov/afni/community/board/read.php?1,162493,162493#msg-162493
because it is the start of a new discussion, and so easier to follow afresh.
–pt
Dear Afni Team,
I am writing because I am new on afni and I encountered the same problem when I try to open the draw dataset plugin through afni GUI. This is the error that is displayed:
++ NOTE: This version of AFNI was built Jun 14 2016 ++
++ NOTE: ‘Define Markers’ is hidden: right-click ‘DataDir’ to see it
** ERROR: No atlas named MNI_Glasser_HCP found in global atlas list
** ERROR: No atlases given were found in global atlas list
Please see whereami help and AFNI_atlas_spaces.niml for information
on how to add atlases to AFNI
Fatal Signal 11 (SIGSEGV) received
Last STATUS: ** free() of non-tracked pointer [thd_ttatlas_query.c line 8577] ??
PLUG_startup_plugin_CB
AFNI:main
Bottom of Debug Stack
** AFNI version = AFNI_16.1.24 Compile date = Jun 14 2016
** [[Precompiled binary linux_openmp_64: Jun 14 2016]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Memory usage: chunks=57631 bytes=33760991
** Crash log is appended to file /home/pbinda1/.afni.crashlog
This error appeared after I tried to install the atlas named MNI_Glasser_HCP. Reading the previous comments I tried to see what came up by typing in the terminal “whereami -show_atlases” and all atlas appear, including MNI_Glasser_HCP, while if I type @AfniEnv -get AFNI_ATLAS_LIST
@AfniEnv -get AFNI_ATLAS_COLORS
nothing comes up.
Another thing, because I found it in another post, is that I tried looking to see if the atlas I added is present in the AFNI_atlas_spaces.niml file and indeed it does not appear.
Can you help me solve the problem?
Thank you very much,
Alessia