I am creating macaque topology using macaque_align.csh.
In the README_AFNI.txt of macaqueatlas_1.2a, there is an example as below.
EX: tcsh -x …/macaque_align.csh macaque1+orig …/…/D99_template.nii.gz
…/…/D99_atlas_1.2a.nii.gz …/…/D99_atlas_1.2a_right.nii.gz | & tee test1.log
We are calculating only right. Do you have to calculate the left side separately after the right side calculation is done?
Thank you in advance to whomever can help! I’m pretty new, so any advice will help.