QC index - how to generate it after it crashed?

AFNI Message Board
1

Hello all,

I have been running Afni proc py to analyze my data but something got stuck during the QC step. and it did not generate the index html page.

I tried running the command below, but it still did not generate the index.html. Any idea how I can do it?

Thank you!

apqc_make_tcsh.py -review_style pythonic -subj_dir . -uvar_json out.ss_review_uvars.json
2

Salut, Lysianne-

Sure, it is actually a 2 step process. After the command you have run (which is executed from the AP results directory), run this one there, too, where <QC_DIR> is the name of the QC directory made in the above step:

apqc_make_html.py -qc_dir <QC_DIR>

Ça marche?

--pt

3

Ca marche tres bien ! Merci beaucoup!!