AFNI version info (afni -ver
):
Precompiled binary macos_13_ARM_clang: May 22 2024 (Version AFNI_24.1.10 'Publius Septimius Geta')
I suspect that the surface generated by @SUMA_Make_Spec_FS
includes not only the cortex but also other regions.
Since FreeSurfer’s recon-all
output contains a label file (lh/rh.cortex.label
) that defines the cortex, can we use this label file to mask the BOLD signals in the surface dataset (niml.dset
) so that only the cortical vertices remain?
The label file is a data table and looks like below:
| Index of Cortex | x coordinate | y coordinate | z coordinate | color code(?) |