How to get the motion regressor on a per slice rather than per volume

AFNI Message Board
1

Hi,

I have been trying to figure out how to obtain the motion regression estimation between a reference diffusive scan and a motion diffusive scan on a per-slice basis rather than per volume. Does some one know how to do this in AFNI?
2

Hi-

I believe that is the job of SLOMOCO (see here for the original paper and see here for recent updates), which stands for slice-oriented motion-correction method. It is actually using primarily AFNI programs under the hood, though it is a stand-alone software.

--pt