AFNI version info (
afni -ver): 23.0.7
I am using afni_proc.py to analyze task-based fMRI. The script runs correctly until it gets to 3dREMLfit. In the output file, it just states "3dREMLfit Command not found". I am using a computing cluster and have worked with our research IT but we cannot find a solution. We have confirmed that the path is correct to the afni module directory and 3dREMLfit is there.
Here is the code lines where the script stops (bolded):
tcsh -x stats.REML_cmd -GOFORIT 99
3dREMLfit -matrix X.xmat.1D -input pb05.sub-016.r01.scale+tlrc.HEAD pb05.sub-016.r02.scale+tlrc.HEAD pb05.sub-016.r03.scale+tlrc.HEAD pb05.sub-016.r04.scale+tlrc.HEAD -fout -tout -Rbuck stats.sub-016_REML -Rvar stats.sub-016_REMLvar -Rerrts errts.sub-016_REML -verb -GOFORIT 99
3dREMLfit: Command not found.
Thank you for your help!