Hello! I’ve read through a few forum posts and have tried redoing the WSL steps. I originally tried with WSL 2 and it wouldn’t work. I swapped to WSL 1 and it’s still not working. Additionally, I ensure that I open/setup XForward before opening Ubuntu and I am working from Windows OS (v10.0.19041). Here is the output! I appreciate any and all help.
hananguzman@Hanan:~$ afni_system_check.py -check_all
-------------------------------- general ---------------------------------
architecture: 64bit
system: Linux
release: 4.19.104-microsoft-standard
version: #1 SMP Wed Feb 19 06:37:35 UTC 2020
distribution: Ubuntu 20.04 focal
number of CPUs: 8
apparent login shell: bash
shell RC file: .bashrc (exists)
--------------------- AFNI and related program tests ---------------------
which afni : /home/hananguzman/abin/afni
afni version : Precompiled binary linux_ubuntu_16_64: Sep 1 2020
: AFNI_20.2.16 'Aulus Vitellius'
AFNI_version.txt : AFNI_20.2.16, linux_ubuntu_16_64, Sep 01 2020
which python : /usr/bin/python
python version : 2.7.18rc1
which R : /usr/bin/R
R version : R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
which tcsh : /usr/bin/tcsh
instances of various programs found in PATH:
afni : 1 (/home/hananguzman/abin/afni)
R : 1 (/usr/bin/R)
python : 1 (/usr/bin/python2.7)
python2 : 1 (/usr/bin/python2.7)
python3 : 1 (/usr/bin/python3.8)
testing ability to start various programs...
afni : success
suma : success
3dSkullStrip : success
uber_subject.py : success
3dAllineate : success
3dRSFC : success
SurfMesh : success
3dClustSim : success
3dMVM : success
checking for R packages...
rPkgsInstall -pkgs ALL -check : success
R RHOME : /usr/lib/R
checking for $HOME files...
.afnirc : found
.sumarc : found
.afni/help/all_progs.COMP : found
------------------------------ python libs -------------------------------
** failed to load module PyQt4
-- PyQt4 is no longer needed for an AFNI bootcamp
** failed to load module matplotlib.pyplot
-- matplotlib.pyplot is not required, but is desirable
-------------------------------- env vars --------------------------------
PATH = /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/mnt/c/Program Files/WindowsApps/CanonicalGroupLimited.UbuntuonWindows_2004.2020.812.0_x64__79rhkp1fndgsc:/mnt/c/Program Files (x86)/Common Files/Oracle/Java/javapath:/mnt/c/Program Files (x86)/Intel/Intel(R) Management Engine Components/iCLS/:/mnt/c/Program Files/Intel/Intel(R) Management Engine Components/iCLS/:/mnt/c/Windows/system32:/mnt/c/Windows:/mnt/c/Windows/System32/Wbem:/mnt/c/Windows/System32/WindowsPowerShell/v1.0/:/mnt/c/Program Files (x86)/Intel/Intel(R) Management Engine Components/DAL:/mnt/c/Program Files/Intel/Intel(R) Management Engine Components/DAL:/mnt/c/Program Files (x86)/Intel/Intel(R) Management Engine Components/IPT:/mnt/c/Program Files/Intel/Intel(R) Management Engine Components/IPT:/mnt/c/Program Files (x86)/Common Files/Seagate/VirtualFile/:/mnt/c/Program Files (x86)/Common Files/Seagate/VirtualFile64/:/mnt/c/Program Files (x86)/Common Files/Seagate/SnapAPI/:/mnt/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common:/mnt/c/Program Files/NVIDIA Corporation/NVIDIA NvDLISR:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt/c/WINDOWS/System32/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.0/:/mnt/c/WINDOWS/System32/OpenSSH/:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt/c/WINDOWS/System32/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.0/:/mnt/c/WINDOWS/System32/OpenSSH/:/mnt/c/Users/hanan/AppData/Local/Microsoft/WindowsApps:/snap/bin:/home/hananguzman/abin
PYTHONPATH =
R_LIBS = /home/hananguzman/R
LD_LIBRARY_PATH =
DYLD_LIBRARY_PATH =
DYLD_FALLBACK_LIBRARY_PATH =
------------------------------ data checks -------------------------------
data dir : found AFNI_data6 under $HOME
top history: 20 Feb 2020 [rickr]: updated FT_analysis examples
data dir : found AFNI_demos under $HOME
top history: 22 Oct 2019 [discoraj]: added Cluster Explorer Demo
data dir : found suma_demo under $HOME
top history: ...s_New/data/Build_tmp on Mon Mar 4 11:56:45 EST 2013
data dir : found afni_handouts under $HOME
atlas : found TT_N27+tlrc under /home/hananguzman/abin
------------------------------ OS specific -------------------------------
which apt-get : /usr/bin/apt-get
apt-get version : apt 2.0.2ubuntu0.1 (amd64)
have Ubuntu system: Ubuntu 20.04 focal
have Ubuntu afni : Precompiled binary linux_ubuntu_16_64: Sep 1 2020
========================= summary, please fix: =========================
* just be aware: login shell 'bash', but our code examples use 'tcsh'
hananguzman@Hanan:~$ afni
Precompiled binary linux_ubuntu_16_64: Sep 1 2020 (Version AFNI_20.2.16 'Aulus Vitellius')
** Version check disabled: AFNI_VERSION_CHECK forbids
Thanks go to BD Ward for great efforts
Initializing: X11Error: Can't open display: :0.0
++ AFNI is detached from terminal.
hananguzman@Hanan:~$ suma
suma:
No input specified, loading some toy surfaces...
Use '.' and ',' to cycle between them.
See suma -help for assistance.
Error: Can't open display: :0.0
hananguzman@Hanan:~$