I am using vol2surf pluggin with WM and Pial surface. But toggling map function say from average to max, mode median etc is not changing the colors I see in SUMA. (i.e. not sure if SUMA is updating). When I change overlay I see somethings are being computed in the command line but still not sure if vol2surf has changed the way mapping is done or not.
I have set debug to 2 and I see this when I press set+keep:
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plug_vol2surf options done : v2s_plugin_opts @ 0x7ffc5e316480
ready = 0
use0, use1 = 1, 1
s0A, s0B = 0, 4
s1A, s1B = 1, 5
gpt_index = -1
gpt_thresh = 0.000000
label[0,1] = ./SAME, ./shift.D99_L_AVG_T1_v2.L.WM.167625.surf.gii
label[2,3] = ./SAME, ./shift.D99_L_AVG_T1_v2.R.WM.167625.surf.gii
surf_vol = D99_template+tlrc
surface options : v2s_opts_t struct at 0x7ffc5e3164d0 :
map, gp_index = 4, 39
debug, dnode = 2, -1
no_head, skip_cols = 0, 126
first_node, last_node = 0, 167624
use_norms, norm_len = 0, 1.000000
norm_dir = 2
f_index, f_steps = 0, 2
f_p1_fr, f_pn_fr = 0.000000, 0.000000
f_p1_mm, f_pn_mm = 0.000000, 0.000000
outfile_1D =
outfile_niml =
segc_file =
fake, argc, argv = 0, 0, (nil)
+d surf_A label: ‘shift.D99_L_AVG_T1_v2.L.WM.167625.surf.gii’
+d surf_B label: ‘shift.D99_L_AVG_T1_v2.L.PIAL.167625.surf.gii’
+d surf_A label: ‘shift.D99_L_AVG_T1_v2.R.WM.167625.surf.gii’
+d surf_B label: ‘shift.D99_L_AVG_T1_v2.R.PIAL.167625.surf.gii’
-d --------------------------------------
afni surface indices, labels and LDPs:
index 0, label ‘shift.D99_L_AVG_T1_v2.L.WM.167625.surf.gii’, LDP ‘./SAME’
index 1, label ‘shift.D99_L_AVG_T1_v2.R.WM.167625.surf.gii’, LDP ‘./SAME’
index 2, label ‘shift.D99_L_AVG_T1_v2.L.MID.167625.surf.gii’, LDP ‘./SAME’
index 3, label ‘shift.D99_L_AVG_T1_v2.R.MID.167625.surf.gii’, LDP ‘./SAME’
index 4, label ‘shift.D99_L_AVG_T1_v2.L.PIAL.167625.surf.gii’, LDP ‘./shift.D99_L_AVG_T1_v2.L.WM.167625.surf.gii’
index 5, label ‘shift.D99_L_AVG_T1_v2.R.PIAL.167625.surf.gii’, LDP ‘./shift.D99_L_AVG_T1_v2.R.WM.167625.surf.gii’