Greetings!
Is there a standard or universal command line parameter that facilitates multicore processor utilization in all afni shell-based programs?
Alternatively, can one compile afni to do such automatically?
Kind regards,
James
AHA.
“If you’ve thought of it, they’ve likely done it.”
linux_openmp_64.tgz
That one?
James
Hi, James-
Some of the programs in AFNI have been compiled with OpenMP (e.g., 3dQwarp, 3dDWUncert, 3dNwarp*, 3dREMLfit, 3dAllineate, and more), and I think all the distributed binaries have the same functionality with it.
You can set an OMP_NUM_THREADS environment variable in your scripts (or in your ~/.cshrc, ~/.bashrc, etc. files) to control the number of threads used by commands, then.
Is that addressing your question adequately?
–pt