I’ve been running a script on another machine that hasn’t had any issues. I recently moved to a new machine and attempted to run the same script, with the following error:
3dNwarpApply -source anat_mprage_unif_ns_shft+orig -master anat_final.ERwD001+tlrc -ainterp wsinc5 -nwarp anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.1D -prefix anat_wo_skull_warped ++ 3dNwarpApply: AFNI version=AFNI_17.1.12 (Jun 23 2017) [64-bit] ++ Authored by: Zhark the Warped ++ opened source dataset 'anat_mprage_unif_ns_shft+orig' ++ -master dataset is 'anat_final.ERwD001+tlrc' ++ Processing -nwarp e[7m** ERROR:e[0m Can't open dataset from file 'anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù' e[7m** ERROR:e[0m Can't open/process 3D warp dataset 'anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù' e[7m** ERROR:e[0m Can't compute nonlinear 3D warp from string 'anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù' e[7m** FATAL ERROR:e[0m Cannot process warp string 'anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù' ** Program compile date = Jun 23 2017
For whatever reason, it replaced the ending of one of the .1D files with “.PŸ@`Ù”. In another attempt to run the script (with the hopes that it was a random glitch) it gave me “.P?@G?” instead.
If anyone has any thoughts (or if I’ve missed something obvious) I’d appreciate it!
macOS Sierra version 10.12.5
afni -ver: Precompiled binary macosx_10.7_local: Jun 23 2017 (Version AFNI_17.1.12)