Hey AFNI folks,
The tedana/multiecho integration in afni proc is extraordinary, but I have a simple (haha) request. Currently, afni_proc provides a nice litany of options for combining the data, however tedana outputs more combined/denoised files than afni_proc has built-in access to. For example, if I wanted to use the dn_ts_T1c or the tsoc_T1c file produced by tedana, I would have to modify the afni_proc output script for each subject. It would be great to add in perhaps one additional option, something like -combine_dset_name or -combine_tedana_dset, that would allow the user to input the filename of the tedana output file themselves.
I prefer this idea over more -combine_method options, as this would somewhat future proof afni_proc if new combination methods are integrated into various tedana instances.
I am also happy to try and add this myself, and do a pull request, but I’m not sure where the modification would be made on the github.
Thanks again for all the awesome!