3dAFNItoNIFTI error

Hi AFNI experts,

I tried to transform data type using 3dAFNItoNIFI, but i got in trouble with the warning message “If you are performing spatial transformations on an oblique dset…”. The afni data type(HEAD+BRIK) shows like top figure, it aligned well, but after changing the data type to nifti, it is not that good as shown at bottom figure. Could anyone give me some suggestion?


Can you try it with 3dcopy?

3dcopy my_data+orig my_data.nii.gz

Thanks, Justin

Okay, i will try that, Thanks a lot!